Authors : Chi Duong V; Center for Biomedical Informatics, Vingroup Big Data Institute, Hanoi, Vietnam.; GeneStory Joint Stock Company, Hanoi, Vietnam.

Subjects: Polymorphism, Single Nucleotide* ; Genome*; Humans

Source: Scientific reports [Sci Rep] 2023 Dec 27; Vol. 13 (1), pp. 23083. Date of Electronic Publication: 2023 Dec 27.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Detection of Mycobacterium tuberculosis multiple strains in sputum samples from patients with pulmonary tuberculosis in south western Uganda using MIRU-VNTR.

Authors : Micheni LN; Department of Microbiology, Mbarara University of Science and Technology, Box 1410, Mbarara, Uganda. .; Department of Microbiology and Immunology, Kampala International University Western Campus, Box 71, Bushenyi, Uganda. .

Subjects: Bacteriological Techniques* ; Genotyping Techniques* ; Interspersed Repetitive Sequences*

Source: Scientific reports [Sci Rep] 2022 Jan 31; Vol. 12 (1), pp. 1656. Date of Electronic Publication: 2022 Jan 31.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Insights into opium poppy (Papaver spp.) genetic diversity from genotyping-by-sequencing analysis.

Authors : Hong UVT; La Trobe Institute for Agriculture and Food, La Trobe University, AgriBio Building, Bundoora, VIC, 3086, Australia.; Australian Research Council Research Hub for Medicinal Agriculture, La Trobe University, AgriBio Building, Bundoora, VIC, 3086, Australia.

Subjects: Genes, Plant* ; Genetic Variation* ; Genome, Plant*

Source: Scientific reports [Sci Rep] 2022 Jan 07; Vol. 12 (1), pp. 111. Date of Electronic Publication: 2022 Jan 07.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Efficient nested-PCR-based method development for detection and genotype identification of Acanthamoeba from a small volume of aquatic environmental sample.

Authors : Hsu TK; Department of Ophthalmology, Cheng Hsin General Hospital, Taipei, Taiwan.; School of Medicine, National Yang Ming Chiao Tung University, Hsinchu, Taiwan.

Subjects: Genotyping Techniques*; Acanthamoeba/Acanthamoeba/Acanthamoeba/*isolation & purification ; Environmental Monitoring/Environmental Monitoring/Environmental Monitoring/*methods

Source: Scientific reports [Sci Rep] 2021 Nov 05; Vol. 11 (1), pp. 21740. Date of Electronic Publication: 2021 Nov 05.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Rapid high-resolution melting genotyping scheme for Escherichia coli based on MLST derived single nucleotide polymorphisms.

Authors : Bezdicek M; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic.; Department of Internal Medicine, Hematology and Oncology, Masaryk University, Brno, Czech Republic.

Subjects: Bacterial Typing Techniques* ; Genes, Bacterial* ; Genotyping Techniques*

Source: Scientific reports [Sci Rep] 2021 Aug 16; Vol. 11 (1), pp. 16572. Date of Electronic Publication: 2021 Aug 16.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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A deterministic genotyping workflow reduces waste of transgenic individuals by two-thirds.

Authors : Strobl F; Physical Biology/Physikalische Biologie (IZN, FB 15), Buchmann Institute for Molecular Life Sciences (BMLS), Cluster of Excellence Frankfurt - Macromolecular Complexes (CEF - MC), Goethe-Universität Frankfurt Am Main (Campus Riedberg), Max-von-Laue-Straße 15, 60438, Frankfurt am Main, Germany. .; Stelzer EHK

Subjects: Animals, Genetically Modified* ; Genotyping Techniques*; Genetic Engineering/Genetic Engineering/Genetic Engineering/*methods

Source: Scientific reports [Sci Rep] 2021 Jul 28; Vol. 11 (1), pp. 15325. Date of Electronic Publication: 2021 Jul 28.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Development of a capture sequencing assay for enhanced detection and genotyping of tick-borne pathogens.

Authors : Jain K; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.; Tagliafierro T

Subjects: Babesia microti/Babesia microti/Babesia microti/*genetics ; Babesiosis/Babesiosis/Babesiosis/*microbiology ; Borrelia burgdorferi/Borrelia burgdorferi/Borrelia burgdorferi/*genetics

Source: Scientific reports [Sci Rep] 2021 Jun 11; Vol. 11 (1), pp. 12384. Date of Electronic Publication: 2021 Jun 11.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Molecular sexing of degraded DNA from elephants and mammoths: a genotyping assay relevant both to conservation biology and to paleogenetics.

Authors : Aznar-Cormano L; CNRS, Centre de Recherche en Paléontologie Paris (CR2P), Muséum national d'Histoire naturelle, Sorbonne Université, 57 rue Cuvier, CP 38, 75005, Paris, France.; Bonnald J

Subjects: Genotype* ; Genotyping Techniques* ; Phylogeny*

Source: Scientific reports [Sci Rep] 2021 Mar 31; Vol. 11 (1), pp. 7227. Date of Electronic Publication: 2021 Mar 31.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Rapid and simple SNP genotyping for Bordetella pertussis epidemic strain MT27 based on a multiplexed single-base extension assay.

Authors : Kamachi K; Department of Bacteriology II, National Institute of Infectious Diseases, Tokyo, Japan. .; Yao SM

Subjects: Genotyping Techniques* ; Multilocus Sequence Typing* ; Polymorphism, Single Nucleotide*

Source: Scientific reports [Sci Rep] 2021 Mar 01; Vol. 11 (1), pp. 4823. Date of Electronic Publication: 2021 Mar 01.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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STAGdb: a 30K SNP genotyping array and Science Gateway for Acropora corals and their dinoflagellate symbionts.

Authors : Kitchen SA; Department of Biology, The Pennsylvania State University, 208 Mueller Laboratory, University Park, PA, 16802, USA.; Von Kuster G

Subjects: Genotyping Techniques*; Anthozoa/Anthozoa/Anthozoa/*genetics ; Dinoflagellida/Dinoflagellida/Dinoflagellida/*genetics

Source: Scientific reports [Sci Rep] 2020 Jul 27; Vol. 10 (1), pp. 12488. Date of Electronic Publication: 2020 Jul 27.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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